DR. Katharina Nöh
Modeling of Biochemical Networks and Cells
Institute of Bio- and Geosciences
IBG-1: Biotechnology
Development of computational methods and tools to analyze cellular processes. Working at the intersection of mathematics, statistics, data science and computational science and engineering. One focus is on the spatio-temporal analysis of single cells and their heterogeneity from live cell imaging.
Publications
ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud
Seiffarth J, Scherr T, Wollenhaupt B, Neumann O, Scharr H, Kohlheyer D, Mikut R, Nöh K - SoftwareX - 2024
microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation
Scherr T, Seiffarth J, Wollenhaupt B, Neumann O, Schilling M, Kohlheyer D, Scharr H, Nöh K, Mikut R - PLOS ONE - 2022
CellSium: versatile cell simulator for microcolony ground truth generation
Sachs C, Ruzaeva K, Seiffarth J, Wiechert W, Berkels B, Nöh K - Bioinformatics Advances - 2022
When a single lineage is not enough: Uncertainty-Aware Tracking for spatio-temporal live-cell image analysis
Theorell A, Seiffarth J, Grünberger A, Nöh K - Oxford University Press (OUP) - 2019
mycelyso – high-throughput analysis of Streptomyces mycelium live cell imaging data
Sachs C, Koepff J, Wiechert W, Grünberger A, Nöh K - Springer Science and Business Media LLC - 2019
Live cell imaging of SOS and prophage dynamics in isogenic bacterial populations
Helfrich S, Pfeifer E, Krämer C, Sachs C, Wiechert W, Kohlheyer D, Nöh K, Frunzke J - Wiley - 2015
